Scientific publications

2014
Comparison of segregations formed in unmodified and Sr-modified Al-Si alloys studied by atom probe tomography and transmission electron microscopy

Barrirero, Jenifer | Engstler, Michael | Ghafoor, Naureen | de Jonge, Niels | Odén, Magnus | Mücklich, Frank

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The mechanical properties of Al-7 wt.% Si can be enhanced by structural modifications of its eutectic phase. Addition of low concentrations of certain elements, in this case 150 wt-ppm Sr, is enough to cause a transition from a coarse plate-like Si structure to a finer coralline one. To fully understand the operating mechanism of this modification, the composition of the eutectic Si phase in unmodified and Sr-modified alloys was analysed and compared by atom probe tomography and (scanning) transmission electron microscopy. The unmodified alloy showed nanometre sized Al-segregations decorating defects, while the Sr-modified sample presented three types of Al–Sr segregations: (1) rod-like segregations that promote smoothening of the Al–Si boundaries in the eutectic phase, (2) particle-like segregations comparable to the ones seen in the unmodified alloy, and (3) planar segregations favouring the formation of twin boundaries. Al and Sr solubilities in Si after solidification were determined to be 430 ± 160 at-ppm and 40 ± 10 at-ppm, respectively. Sr predominantly segregates to the Si phase confirming its importance in the modification of the eutectic growth.

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Journal of Alloys and Compounds,
2014, 611, 410-421.

Combined Scanning Transmission Electron Microscopy tilt- and focal series

Dahmen, Tim | Baudoin, Jean-Pierre | Lupini, Andrew R. | Kübel,Christian | Slusallek, Philipp | de Jonge, Niels

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In this study, a combined tilt- and focal series is proposed as a new recording scheme for high-angle annular dark-field scanning transmission electron microscopy (STEM) tomography. Three-dimensional (3D) data were acquired by mechanically tilting the specimen, and recording a through-focal series at each tilt direction. The sample was a whole-mount macrophage cell with embedded gold nanoparticles. The tilt-focal algebraic reconstruction technique (TF-ART) is introduced as a new algorithm to reconstruct tomograms from such combined tilt- and focal series. The feasibility of TF-ART was demonstrated by 3D reconstruction of the experimental 3D data. The results were compared with a conventional STEM tilt series of a similar sample. The combined tilt- and focal series led to smaller "missing wedge" artifacts, and a higher axial resolution than obtained for the STEM tilt series, thus improving on one of the main issues of tilt series-based electron tomography.

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Microscopy and Microanalysis,
2014, 20 (2), 548-560.

TFS: Combined tilt- and focal series scanning transmission electron microscopy

Dahmen, Tim | Baudoin, Jean-Pierre | Lupini, Andrew R. | Kübel, Christian | Slusallek, Philipp | de Jonge, Niels

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Microscopy and Microanalysis,
2014, 20 (Supplement S3), 786-787.

Introduction to special issue on electron microscopy of specimens in liquid

Microscopy and Microanalysis,
2014, 20 (2), 315-316.

Liquid scanning transmission electron microscopy: Imaging protein complexes in their native environment in whole Eukaryotic cells

Peckys, Diana B. | de Jonge, Niels

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Scanning transmission electron microscopy (STEM) of specimens in liquid, so-called Liquid STEM, is capable of imaging the individual subunits of macromolecular complexes in whole eukaryotic cells in liquid. This paper discusses this new microscopy modality within the context of state-of-the-art microscopy of cells. The principle of operation and equations for the resolution are described. The obtained images are different from those acquired with standard transmission electron microscopy showing the cellular ultrastructure. Instead, contrast is obtained on specific labels. Images can be recorded in two ways, either via STEM at 200 keV electron beam energy using a microfluidic chamber enclosing the cells, or via environmental scanning electron microscopy at 30 keV of cells in a wet environment. The first series of experiments involved the epidermal growth factor receptor labeled with gold nanoparticles. The labels were imaged in whole fixed cells with nanometer resolution. Since the cells can be kept alive in the microfluidic chamber, it is also feasible to detect the labels in unfixed, live cells. The rapid sample preparation and imaging allows studies of multiple whole cells.

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Microscopy and Microanalysis,
2014, 20 (2), 346-365.

Gold nanoparticle uptake in whole cells in liquid examined by environmental Scanning Electron Microscopy

Peckys, Diana B. | de Jonge, Niels

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The size of gold nanoparticles (AuNPs) can influence various aspects of their cellular uptake. Light microscopy is not capable of resolving most AuNPs, while electron microscopy (EM) is not practically capable of acquiring the necessary statistical data from many cells and the results may suffer from various artifacts. Here, we demonstrate the use of a fast EM method for obtaining high-resolution data from a much larger population of cells than is usually feasible with conventional EM. A549 (human lung carcinoma) cells were subjected to uptake protocols with 10, 15, or 30 nm diameter AuNPs with adsorbed serum proteins. After 20 min, 24 h, or 45 h, the cells were fixed and imaged in whole in a thin layer of liquid water with environmental scanning electron microscopy equipped with a scanning transmission electron microscopy detector. The fast preparation and imaging of 145 whole cells in liquid allowed collection of nanoscale data within an exceptionally small amount of time of ~80 h. Analysis of 1,041 AuNP-filled vesicles showed that the long-term AuNP storing lysosomes increased their average size by 80 nm when AuNPs with 30 nm diameter were uptaken, compared to lysosomes of cells incubated with AuNPs of 10 and 15 nm diameter.

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Microscopy and Microanalysis,
2014, 20 (01), 189-197.

Liquid scanning transmission electron microscopy: Nanoscale imaging in micrometers-thick liquids

Schuh, Tobias | de Jonge, Niels

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Scanning transmission electron microscopy (STEM) of specimens in liquid is possible using a microfluidic chamber with thin silicon nitride windows. This paper includes an analytic equation of the resolution as a function of the sample thickness and the vertical position of an object in the liquid. The equipment for STEM of liquid specimen is briefly described. STEM provides nanometer resolution in micrometer-thick liquid layers with relevance for both biological research and materials science. Using this technique, we investigated tagged proteins in whole eukaryotic cells, and gold nanoparticles in liquid with time-lapse image series. Possibly future applications are discussed. / La microscopie électronique à balayage en transmission (STEM) d'échantillons immergés dans un liquide est possible en utilisant une chambre microfluidique réalisée avec de fines fenêtres en nitrure de silicium. Cet article introduit d'abord une équation analytique permettant d'estimer la résolution spatiale accessible en fonction de l'épaisseur totale de l'échantillon et de la position de l'objet d'intérêt en son sein. Après une description brève de l'équipement utilisable, nous montrons comment cette approche STEM permet d'observer avec une résolution nanométrique des objets d'intérêt en biologie ou en science des matériaux, plongés dans une couche liquide de plusieurs micromètres d'épaisseur. Avec cette technique, nous avons étudié la distribution de protéines marquées dans des cellules eucaryotes complètes et celle dynamique de nanoparticules d'or dans un liquide au moyen de séries d'images résolues en temps. Enfin, nous proposons quelques grands axes pour de futures applications.

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Comptes Rendus Physique,
2014, 15 (2-3), 214-223.

The role of physical and chemical properties of Pd nanostructured materials immobilized on inorganic carriers on ion formation in atmospheric pressure laser desorption/ionization mass spectrometry

Silina, Yuliya E. | Koch, Marcus | Volmer, Dietrich A.

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Fundamental parameters influencing the ion-producing efficiency of palladium nanostructures (nanoparticles [Pd-NP], nanoflowers, nanofilms) during laser irradiation were studied in this paper. The nanostructures were immobilized on the surface of different solid inorganic carrier materials (porous and mono-crystalline silicon, anodic porous aluminum oxide, glass and polished steel) by using classical galvanic deposition, electroless local deposition and sputtering. It was the goal of this study to investigate the influence of both the nanoparticular layer as well as the carrier material on ion production for selected analyte molecules. Our experiments demonstrated that the dimensions of the synthesized nanostructures, the thickness of the active layers, surface disorders, thermal conductivity and physically or chemically adsorbed water influenced signal intensities of analyte ions during surface-assisted laser desorption/ionization (SALDI) while no effects such as plasmon resonance, photoelectric effect or catalytic activity were expected to occur. Excellent LDI abilities were seen for Pd-NPs immobilized on steel, while Pd nanoflowers on porous silicon exhibited several disadvantages; viz, strong memory effects, dependency of the analytical signal on amount of physically and chemically adsorbed water inside porous carrier, reduced SALDI activity from unstable connections between Pd and semiconductor material, decrease of the melting point of pure silicon after Pd immobilization and resulting strong laser ablation of metal/semiconductor complex, as well as significantly changed surface morphology after laser irradiation. The analytical performance of Pd-NP/steel was further improved by applying a hydrophobic coating to the steel surface before galvanic deposition. This procedure increased the distance between Pd-NPs, thus reducing thermal stress upon LDI; it simultaneously decreased spot sizes of deposited sample solutions.

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Journal of Mass Spectrometry,
2014, 49 (6), 468-480.

Novel galvanic nanostructures of Ag and Pd for efficient laser desorption/ionization of low molecular weight compounds

Silina, Yuliya E. | Meier, Florian | Nebolsin, Valeriy A. | Koch, Marcus | Volmer, Dietrich A.

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A simple approach for synthesis of palladium and silver nanostructures with readily adjustable morphologies was developed using galvanic electrochemical deposition, for application to surface-assisted laser desorption/ionization (SALDI) of small biological molecules. A range of fatty acids, triglycerides, carbohydrates, and antibiotics were investigated to assess the performance of the new materials. Intense analyte cations were generated from the galvanic surfaces upon UV laser irradiation such as potassium adducts for a film thickness <100 nm (originating from impurities of the electrolyte solution) and Pd and Ag cluster ions for films with a thickness >120 nm. Possible laser desorption/ionization mechanisms of these galvanic structures are discussed. The films exhibited self-organizing abilities and adjustable morphologies by changing electrochemical parameters. They did not require any stabilizing agents and were inexpensive and very easy to produce. SALDI analysis showed that the materials were stable under ambient conditions and analytical results with excellent measurement reproducibility and detection sensitivity similar to MALDI were obtained. Finally, we applied the galvanic surfaces to fast screening of natural oils with minimum sample preparation.

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Journal of The American Society for Mass Spectrometry,
2014, 25 (5), 841-851.

Preferential sliding directions on graphite

Balakrishna, Soorali Ganeshamurthy | de Wijn, Astrid S. | Bennewitz, Roland

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The anisotropy of friction on graphitic surfaces is investigated by a combined friction force microscopy and modeling study. Friction vectors deviate up to 15° from pulling directions. The strongest deviations are found for pulling directions which lie almost along one zigzag direction of the honeycomb structure, the preferred sliding direction on graphite surfaces and epitaxial graphene grown on SiC(0001). Atomic stick-slip events along and across molecular rows determine direction and magnitude of friction. Simulation and modeling reveal the role of temperature and of the two-dimensional character of the surface potential for the friction anisotropy.

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Physical Review B,
2014, 89 (24), 245440.